13 Commits

Author SHA1 Message Date
jdl
6b0b7408bc iterfunc experiment 2023-12-24 20:41:43 +01:00
jdl
5ffd50bdea UpsertFunc 2023-12-19 13:59:57 +01:00
jdl
91b2ba30f6 Colleciton.Has convenience function 2023-12-16 21:06:36 +01:00
jdl
c2828592ac Added UpdateFunc for safer updates. 2023-12-06 20:39:08 +01:00
jdl
13e53f0c88 Updated error type 2023-12-05 11:24:03 +01:00
jdl
54c9e89c3e Fixed unwrap method. 2023-12-05 11:16:35 +01:00
jdl
875957f662 Fixed WAL gc age bug 2023-12-05 09:54:41 +01:00
jdl
b251368b09 Cleanup, no logic changes. 2023-12-04 20:25:37 +01:00
jdl
c2a1a7f247 Fix data corruption bug (overwrite data) 2023-12-04 20:05:15 +01:00
jdl
9785637b3b Code cleanup / beta stuff 2023-12-03 20:38:45 +01:00
jdl
728b34b684 Fix streaming handlers for https. 2023-12-03 20:26:27 +01:00
jdl
8be663a0a0 Fix streaming handlers for https. 2023-12-03 20:24:36 +01:00
jdl
6da018353a Cleanup 2023-12-03 19:57:26 +01:00
17 changed files with 176 additions and 269 deletions

View File

@@ -4,6 +4,7 @@ Replicated in-memory database and file store.
## TODO
* [ ] mdb: Tests for using `nil` snapshots ?
* [ ] mdb: tests for sanitize and validate functions
* [ ] Test: lib/wal iterator w/ corrupt file (random corruptions)
* [ ] Test: lib/wal io.go

2
go.mod
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@@ -1,6 +1,6 @@
module git.crumpington.com/public/jldb
go 1.21.1
go 1.22
require (
github.com/google/btree v1.1.2

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@@ -8,26 +8,27 @@ import (
)
type Error struct {
msg string
code int64
Code int64
Msg string
StackTrace string
collection string
index string
stackTrace string
err error // Wrapped error
}
func NewErr(code int64, msg string) *Error {
return &Error{
msg: msg,
code: code,
Code: code,
Msg: msg,
}
}
func (e *Error) Error() string {
if e.collection != "" || e.index != "" {
return fmt.Sprintf(`[%d] (%s/%s) %s`, e.code, e.collection, e.index, e.msg)
return fmt.Sprintf(`[%d] (%s/%s) %s`, e.Code, e.collection, e.index, e.Msg)
} else {
return fmt.Sprintf("[%d] %s", e.code, e.msg)
return fmt.Sprintf("[%d] %s", e.Code, e.Msg)
}
}
@@ -36,11 +37,15 @@ func (e *Error) Is(rhs error) bool {
if !ok {
return false
}
return e.code == e2.code
return e.Code == e2.Code
}
func (e *Error) Unwrap() error {
return e.err
}
func (e *Error) WithErr(err error) *Error {
if e2, ok := err.(*Error); ok && e2.code == e.code {
if e2, ok := err.(*Error); ok && e2.Code == e.Code {
return e2
}
@@ -49,18 +54,11 @@ func (e *Error) WithErr(err error) *Error {
return e2
}
func (e *Error) Unwrap() error {
if e.err != nil {
return e.err
}
return e
}
func (e *Error) WithMsg(msg string, args ...any) *Error {
err := *e
err.msg += ": " + fmt.Sprintf(msg, args...)
if len(err.stackTrace) == 0 {
err.stackTrace = string(debug.Stack())
err.Msg += ": " + fmt.Sprintf(msg, args...)
if len(err.StackTrace) == 0 {
err.StackTrace = string(debug.Stack())
}
return &err
}
@@ -78,16 +76,16 @@ func (e *Error) WithIndex(s string) *Error {
}
func (e *Error) msgTruncacted() string {
if len(e.msg) > 255 {
return e.msg[:255]
if len(e.Msg) > 255 {
return e.Msg[:255]
}
return e.msg
return e.Msg
}
func (e *Error) Write(w io.Writer) error {
msg := e.msgTruncacted()
if err := binary.Write(w, binary.LittleEndian, e.code); err != nil {
if err := binary.Write(w, binary.LittleEndian, e.Code); err != nil {
return IO.WithErr(err)
}
@@ -103,7 +101,7 @@ func (e *Error) Read(r io.Reader) error {
size uint8
)
if err := binary.Read(r, binary.LittleEndian, &e.code); err != nil {
if err := binary.Read(r, binary.LittleEndian, &e.Code); err != nil {
return IO.WithErr(err)
}
@@ -116,6 +114,6 @@ func (e *Error) Read(r io.Reader) error {
return IO.WithErr(err)
}
e.msg = string(msgBuf)
e.Msg = string(msgBuf)
return nil
}

View File

@@ -10,12 +10,12 @@ func FmtDetails(err error) string {
var s string
if e.collection != "" || e.index != "" {
s = fmt.Sprintf(`[%d] (%s/%s) %s`, e.code, e.collection, e.index, e.msg)
s = fmt.Sprintf(`[%d] (%s/%s) %s`, e.Code, e.collection, e.index, e.Msg)
} else {
s = fmt.Sprintf("[%d] %s", e.code, e.msg)
s = fmt.Sprintf("[%d] %s", e.Code, e.Msg)
}
if len(e.stackTrace) != 0 {
s += "\n\nStack Trace:\n" + e.stackTrace + "\n"
if len(e.StackTrace) != 0 {
s += "\n\nStack Trace:\n" + e.StackTrace + "\n"
}
return s

View File

@@ -12,6 +12,7 @@ const (
pathStreamWAL = "stream-wal"
)
// TODO: Remove this!
func (rep *Replicator) Handle(w http.ResponseWriter, r *http.Request) {
// We'll handle two types of requests: HTTP GET requests for JSON, or
// streaming requets for state or wall.

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@@ -15,7 +15,7 @@ func (rep *Replicator) runWALGC() {
select {
case <-ticker.C:
state := rep.getState()
before := time.Now().Unix() - rep.conf.WALSegMaxAgeSec
before := time.Now().Unix() - rep.conf.WALSegGCAgeSec
if err := rep.wal.DeleteBefore(before, state.SeqNum); err != nil {
log.Printf("[WAL-GC] failed to delete wal segments: %v", err)
}

View File

@@ -2,6 +2,7 @@ package rep
import (
"io"
"log"
"net"
"os"
"sync"
@@ -94,41 +95,49 @@ func Open(app App, conf Config) (*Replicator, error) {
rep.client = newClient(rep.conf.PrimaryEndpoint, rep.conf.ReplicationPSK, rep.conf.NetTimeout)
if err := rep.initDirectories(); err != nil {
log.Printf("Failed to init directories: %v", err)
return nil, err
}
if err := rep.acquireLock(); err != nil {
rep.Close()
log.Printf("Failed to acquire lock: %v", err)
return nil, err
}
if err := rep.loadLocalState(); err != nil {
rep.Close()
log.Printf("Failed to load local state: %v", err)
return nil, err
}
if err := rep.openWAL(); err != nil {
rep.Close()
log.Printf("Failed to open WAL: %v", err)
return nil, err
}
if err := rep.recvStateIfNecessary(); err != nil {
rep.Close()
log.Printf("Failed to recv state: %v", err)
return nil, err
}
if err := rep.app.InitStorage(); err != nil {
rep.Close()
log.Printf("Failed to init storage: %v", err)
return nil, err
}
if err := rep.replay(); err != nil {
rep.Close()
log.Printf("Failed to replay: %v", err)
return nil, err
}
if err := rep.app.LoadFromStorage(); err != nil {
rep.Close()
log.Printf("Failed to load from storage: %v", err)
return nil, err
}

View File

@@ -159,6 +159,15 @@ func (c *Collection[T]) Get(tx *Snapshot, id uint64) *T {
return c.ByID.Get(tx, item)
}
func (c *Collection[T]) Has(tx *Snapshot, id uint64) bool {
if tx == nil {
tx = c.db.Snapshot()
}
item := new(T)
c.setID(item, id)
return c.ByID.Has(tx, item)
}
func (c *Collection[T]) Insert(tx *Snapshot, userItem *T) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
@@ -237,6 +246,27 @@ func (c *Collection[T]) update(tx *Snapshot, userItem *T) error {
return nil
}
func (c *Collection[T]) UpdateFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.updateFunc(tx, id, update)
})
}
return c.updateFunc(tx, id, update)
}
func (c *Collection[T]) updateFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
item := c.Get(tx, id)
if item == nil {
return errs.NotFound
}
if err := update(item); err != nil {
return err
}
c.setID(item, id) // Don't allow the ID to change.
return c.update(tx, item)
}
func (c *Collection[T]) Upsert(tx *Snapshot, item *T) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
@@ -257,6 +287,36 @@ func (c *Collection[T]) upsert(tx *Snapshot, item *T) error {
return err
}
func (c *Collection[T]) UpsertFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
if tx == nil {
c.db.Update(func(tx *Snapshot) error {
return c.upsertFunc(tx, id, update)
})
}
return c.upsertFunc(tx, id, update)
}
func (c *Collection[T]) upsertFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
insert := false
item := c.Get(tx, id)
if item == nil {
item = new(T)
insert = true
}
if err := update(item); err != nil {
return err
}
c.setID(item, id) // Don't allow the ID to change.
if insert {
return c.insert(tx, item)
}
return c.update(tx, item)
}
func (c *Collection[T]) Delete(tx *Snapshot, itemID uint64) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
@@ -275,6 +335,9 @@ func (c *Collection[T]) delete(tx *Snapshot, itemID uint64) error {
}
func (c *Collection[T]) Count(tx *Snapshot) int {
if tx == nil {
tx = c.db.Snapshot()
}
return c.ByID.Count(tx)
}

View File

@@ -743,29 +743,25 @@ var testDBTestCases = []DBTestCase{{
first := true
pivot := User{Name: "User1"}
db.Users.ByName.AscendAfter(tx, &pivot, func(u *User) bool {
for u := range db.Users.ByName.AscendAfter(tx, &pivot) {
u.Name += "Mod"
if err = db.Users.Update(tx, u); err != nil {
return false
return err
}
if first {
first = false
return true
continue
}
prev := db.Users.ByID.Get(tx, &User{ID: u.ID - 1})
if prev == nil {
err = errors.New("Previous user not found")
return false
return errors.New("Previous user not found")
}
if !strings.HasSuffix(prev.Name, "Mod") {
err = errors.New("Incorrect user name: " + prev.Name)
return false
return errors.New("Incorrect user name: " + prev.Name)
}
}
return true
})
return nil
},
@@ -801,29 +797,26 @@ var testDBTestCases = []DBTestCase{{
}
first := true
db.Users.ByName.DescendAfter(tx, &User{Name: "User5Mod"}, func(u *User) bool {
for u := range db.Users.ByName.DescendAfter(tx, &User{Name: "User5Mod"}) {
u.Name = strings.TrimSuffix(u.Name, "Mod")
if err = db.Users.Update(tx, u); err != nil {
return false
return err
}
if first {
first = false
return true
continue
}
prev := db.Users.ByID.Get(tx, &User{ID: u.ID + 1})
if prev == nil {
err = errors.New("Previous user not found")
return false
return errors.New("Previous user not found")
}
if strings.HasSuffix(prev.Name, "Mod") {
err = errors.New("Incorrect user name: " + prev.Name)
return false
return errors.New("Incorrect user name: " + prev.Name)
}
}
return true
})
return nil
},

View File

@@ -1,138 +0,0 @@
package mdb
import (
"fmt"
"reflect"
"testing"
)
func TestDBList(t *testing.T) {
db := NewTestDBPrimary(t, t.TempDir())
var (
user1 = User{
ID: NewID(),
Name: "User1",
Email: "user1@gmail.com",
}
user2 = User{
ID: NewID(),
Name: "User2",
Email: "user2@gmail.com",
}
user3 = User{
ID: NewID(),
Name: "User3",
Email: "user3@gmail.com",
}
user1Data = make([]UserDataItem, 10)
user2Data = make([]UserDataItem, 4)
user3Data = make([]UserDataItem, 8)
)
err := db.Update(func(tx *Snapshot) error {
if err := db.Users.Insert(tx, &user1); err != nil {
return err
}
if err := db.Users.Insert(tx, &user2); err != nil {
return err
}
for i := range user1Data {
user1Data[i] = UserDataItem{
ID: NewID(),
UserID: user1.ID,
Name: fmt.Sprintf("Name1: %d", i),
Data: fmt.Sprintf("Data: %d", i),
}
if err := db.UserData.Insert(tx, &user1Data[i]); err != nil {
return err
}
}
for i := range user2Data {
user2Data[i] = UserDataItem{
ID: NewID(),
UserID: user2.ID,
Name: fmt.Sprintf("Name2: %d", i),
Data: fmt.Sprintf("Data: %d", i),
}
if err := db.UserData.Insert(tx, &user2Data[i]); err != nil {
return err
}
}
for i := range user3Data {
user3Data[i] = UserDataItem{
ID: NewID(),
UserID: user3.ID,
Name: fmt.Sprintf("Name3: %d", i),
Data: fmt.Sprintf("Data: %d", i),
}
if err := db.UserData.Insert(tx, &user3Data[i]); err != nil {
return err
}
}
return nil
})
if err != nil {
t.Fatal(err)
}
type TestCase struct {
Name string
Args ListArgs[UserDataItem]
Expected []UserDataItem
}
cases := []TestCase{
{
Name: "User1 all",
Args: ListArgs[UserDataItem]{
After: &UserDataItem{
UserID: user1.ID,
},
While: func(item *UserDataItem) bool {
return item.UserID == user1.ID
},
},
Expected: user1Data,
}, {
Name: "User1 limited",
Args: ListArgs[UserDataItem]{
After: &UserDataItem{
UserID: user1.ID,
},
While: func(item *UserDataItem) bool {
return item.UserID == user1.ID
},
Limit: 4,
},
Expected: user1Data[:4],
},
}
for _, tc := range cases {
t.Run(tc.Name, func(t *testing.T) {
tx := db.Snapshot()
l := db.UserData.ByName.List(tx, &tc.Args, nil)
if len(l) != len(tc.Expected) {
t.Fatal(tc.Name, l)
}
for i := range l {
if !reflect.DeepEqual(*l[i], tc.Expected[i]) {
t.Fatal(tc.Name, l)
}
}
})
}
}

View File

@@ -73,6 +73,10 @@ type Database struct {
}
func New(conf Config) *Database {
if conf.NetTimeout <= 0 {
conf.NetTimeout = time.Minute
}
if conf.MaxConcurrentUpdates <= 0 {
conf.MaxConcurrentUpdates = 32
}

View File

@@ -1,7 +1,6 @@
package mdb
import (
"fmt"
"reflect"
"testing"
)
@@ -20,18 +19,16 @@ func (i Index[T]) AssertEqual(t *testing.T, tx1, tx2 *Snapshot) {
}
errStr := ""
i.Ascend(tx1, func(item1 *T) bool {
iter := i.Ascend(tx1)
for item1 := range iter {
item2 := i.Get(tx2, item1)
if item2 == nil {
errStr = fmt.Sprintf("Indices don't match. %v not found.", item1)
return false
t.Fatalf("Indices don't match. %v not found.", item1)
}
if !reflect.DeepEqual(item1, item2) {
errStr = fmt.Sprintf("%v != %v", item1, item2)
return false
t.Fatalf("%v != %v", item1, item2)
}
}
return true
})
if errStr != "" {
t.Fatal(errStr)

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@@ -1,6 +1,7 @@
package mdb
import (
"iter"
"unsafe"
"github.com/google/btree"
@@ -111,85 +112,40 @@ func (i *Index[T]) Max(tx *Snapshot) *T {
return nil
}
func (i *Index[T]) Ascend(tx *Snapshot, each func(*T) bool) {
func (i *Index[T]) Ascend(tx *Snapshot) iter.Seq[*T] {
tx = i.ensureSnapshot(tx)
return func(yield func(*T) bool) {
i.btreeForIter(tx).Ascend(func(t *T) bool {
return each(i.copy(t))
return yield(i.copy(t))
})
}
}
func (i *Index[T]) AscendAfter(tx *Snapshot, after *T, each func(*T) bool) {
func (i *Index[T]) AscendAfter(tx *Snapshot, after *T) iter.Seq[*T] {
tx = i.ensureSnapshot(tx)
return func(yield func(*T) bool) {
i.btreeForIter(tx).AscendGreaterOrEqual(after, func(t *T) bool {
return each(i.copy(t))
return yield(i.copy(t))
})
}
}
func (i *Index[T]) Descend(tx *Snapshot, each func(*T) bool) {
func (i *Index[T]) Descend(tx *Snapshot) iter.Seq[*T] {
tx = i.ensureSnapshot(tx)
return func(yield func(*T) bool) {
i.btreeForIter(tx).Descend(func(t *T) bool {
return each(i.copy(t))
return yield(i.copy(t))
})
}
}
func (i *Index[T]) DescendAfter(tx *Snapshot, after *T, each func(*T) bool) {
func (i *Index[T]) DescendAfter(tx *Snapshot, after *T) iter.Seq[*T] {
tx = i.ensureSnapshot(tx)
return func(yield func(*T) bool) {
i.btreeForIter(tx).DescendLessOrEqual(after, func(t *T) bool {
return each(i.copy(t))
return yield(i.copy(t))
})
}
type ListArgs[T any] struct {
Desc bool // True for descending order, otherwise ascending.
After *T // If after is given, iterate after (and including) the value.
While func(*T) bool // Continue iterating until While is false.
Limit int // Maximum number of items to return. 0 => All.
}
func (i *Index[T]) List(tx *Snapshot, args *ListArgs[T], out []*T) []*T {
tx = i.ensureSnapshot(tx)
if args == nil {
args = &ListArgs[T]{}
}
if args.Limit < 0 {
return nil
}
if args.While == nil {
args.While = func(*T) bool { return true }
}
size := args.Limit
if size == 0 {
size = 32 // Why not?
}
items := out[:0]
each := func(item *T) bool {
if !args.While(item) {
return false
}
items = append(items, item)
return args.Limit == 0 || len(items) < args.Limit
}
if args.Desc {
if args.After != nil {
i.DescendAfter(tx, args.After, each)
} else {
i.Descend(tx, each)
}
} else {
if args.After != nil {
i.AscendAfter(tx, args.After, each)
} else {
i.Ascend(tx, each)
}
}
return items
}
func (i *Index[T]) Count(tx *Snapshot) int {

View File

@@ -1,9 +1,8 @@
package mdb
func (i Index[T]) Dump(tx *Snapshot) (l []T) {
i.Ascend(tx, func(t *T) bool {
for t := range i.Ascend(tx) {
l = append(l, *t)
return true
})
}
return l
}

View File

@@ -51,6 +51,10 @@ func (f *freeList) Push(pages ...uint64) {
}
}
func (f *freeList) SetNextPage(nextPage uint64) {
f.nextPage = nextPage
}
func (f *freeList) Pop(count int, out []uint64) []uint64 {
out = out[:0]

View File

@@ -13,14 +13,19 @@ type Index struct {
}
func NewIndex(f *File) (*Index, error) {
firstPage, err := f.pageCount()
if err != nil {
return nil, err
}
idx := &Index{
fList: newFreeList(0),
fList: newFreeList(firstPage),
aList: *newAllocList(),
seen: map[[2]uint64]struct{}{},
mask: []bool{},
}
err := f.iterate(func(pageID uint64, page dataPage) error {
err = f.iterate(func(pageID uint64, page dataPage) error {
header := page.Header()
switch header.PageType {
case pageTypeHead:

View File

@@ -134,6 +134,21 @@ func (pf *File) writePage(page dataPage, id uint64) error {
// Reading
// ----------------------------------------------------------------------------
func (pf *File) pageCount() (uint64, error) {
fi, err := pf.f.Stat()
if err != nil {
return 0, errs.IO.WithErr(err)
}
fileSize := fi.Size()
if fileSize%pageSize != 0 {
return 0, errs.Corrupt.WithMsg("File size isn't a multiple of page size.")
}
maxPage := uint64(fileSize / pageSize)
return maxPage, nil
}
func (pf *File) iterate(each func(pageID uint64, page dataPage) error) error {
pf.lock.RLock()
defer pf.lock.RUnlock()