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18 Commits

Author SHA1 Message Date
jdl
125e090cb7 ?? 2024-10-25 14:56:59 +02:00
jdl
0518c5dcca Fix memory leak in secondary, cleanup code. 2024-01-06 20:50:20 +01:00
jdl
6b0b7408bc iterfunc experiment 2023-12-24 20:41:43 +01:00
jdl
5ffd50bdea UpsertFunc 2023-12-19 13:59:57 +01:00
jdl
91b2ba30f6 Colleciton.Has convenience function 2023-12-16 21:06:36 +01:00
jdl
c2828592ac Added UpdateFunc for safer updates. 2023-12-06 20:39:08 +01:00
jdl
13e53f0c88 Updated error type 2023-12-05 11:24:03 +01:00
jdl
54c9e89c3e Fixed unwrap method. 2023-12-05 11:16:35 +01:00
jdl
875957f662 Fixed WAL gc age bug 2023-12-05 09:54:41 +01:00
jdl
b251368b09 Cleanup, no logic changes. 2023-12-04 20:25:37 +01:00
jdl
c2a1a7f247 Fix data corruption bug (overwrite data) 2023-12-04 20:05:15 +01:00
jdl
9785637b3b Code cleanup / beta stuff 2023-12-03 20:38:45 +01:00
jdl
728b34b684 Fix streaming handlers for https. 2023-12-03 20:26:27 +01:00
jdl
8be663a0a0 Fix streaming handlers for https. 2023-12-03 20:24:36 +01:00
jdl
6da018353a Cleanup 2023-12-03 19:57:26 +01:00
jdl
5528c264d3 Added count functionality 2023-11-21 18:35:37 +01:00
jdl
9078335d70 Allow nil Snapshot for most ops, CRUD for collection 2023-11-21 17:41:55 +01:00
jdl
3c9e5505ab Added some convenience functions. 2023-11-20 20:23:44 +01:00
26 changed files with 535 additions and 205 deletions

View File

@ -4,6 +4,7 @@ Replicated in-memory database and file store.
## TODO ## TODO
* [ ] mdb: Tests for using `nil` snapshots ?
* [ ] mdb: tests for sanitize and validate functions * [ ] mdb: tests for sanitize and validate functions
* [ ] Test: lib/wal iterator w/ corrupt file (random corruptions) * [ ] Test: lib/wal iterator w/ corrupt file (random corruptions)
* [ ] Test: lib/wal io.go * [ ] Test: lib/wal io.go

3
go.mod
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@ -1,9 +1,10 @@
module git.crumpington.com/public/jldb module git.crumpington.com/public/jldb
go 1.21.1 go 1.22
require ( require (
github.com/google/btree v1.1.2 github.com/google/btree v1.1.2
go.uber.org/goleak v1.3.0
golang.org/x/net v0.15.0 golang.org/x/net v0.15.0
golang.org/x/sys v0.12.0 golang.org/x/sys v0.12.0
) )

10
go.sum
View File

@ -1,6 +1,16 @@
github.com/davecgh/go-spew v1.1.1 h1:vj9j/u1bqnvCEfJOwUhtlOARqs3+rkHYY13jYWTU97c=
github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
github.com/google/btree v1.1.2 h1:xf4v41cLI2Z6FxbKm+8Bu+m8ifhj15JuZ9sa0jZCMUU= github.com/google/btree v1.1.2 h1:xf4v41cLI2Z6FxbKm+8Bu+m8ifhj15JuZ9sa0jZCMUU=
github.com/google/btree v1.1.2/go.mod h1:qOPhT0dTNdNzV6Z/lhRX0YXUafgPLFUh+gZMl761Gm4= github.com/google/btree v1.1.2/go.mod h1:qOPhT0dTNdNzV6Z/lhRX0YXUafgPLFUh+gZMl761Gm4=
github.com/pmezard/go-difflib v1.0.0 h1:4DBwDE0NGyQoBHbLQYPwSUPoCMWR5BEzIk/f1lZbAQM=
github.com/pmezard/go-difflib v1.0.0/go.mod h1:iKH77koFhYxTK1pcRnkKkqfTogsbg7gZNVY4sRDYZ/4=
github.com/stretchr/testify v1.8.0 h1:pSgiaMZlXftHpm5L7V1+rVB+AZJydKsMxsQBIJw4PKk=
github.com/stretchr/testify v1.8.0/go.mod h1:yNjHg4UonilssWZ8iaSj1OCr/vHnekPRkoO+kdMU+MU=
go.uber.org/goleak v1.3.0 h1:2K3zAYmnTNqV73imy9J1T3WC+gmCePx2hEGkimedGto=
go.uber.org/goleak v1.3.0/go.mod h1:CoHD4mav9JJNrW/WLlf7HGZPjdw8EucARQHekz1X6bE=
golang.org/x/net v0.15.0 h1:ugBLEUaxABaB5AJqW9enI0ACdci2RUd4eP51NTBvuJ8= golang.org/x/net v0.15.0 h1:ugBLEUaxABaB5AJqW9enI0ACdci2RUd4eP51NTBvuJ8=
golang.org/x/net v0.15.0/go.mod h1:idbUs1IY1+zTqbi8yxTbhexhEEk5ur9LInksu6HrEpk= golang.org/x/net v0.15.0/go.mod h1:idbUs1IY1+zTqbi8yxTbhexhEEk5ur9LInksu6HrEpk=
golang.org/x/sys v0.12.0 h1:CM0HF96J0hcLAwsHPJZjfdNzs0gftsLfgKt57wWHJ0o= golang.org/x/sys v0.12.0 h1:CM0HF96J0hcLAwsHPJZjfdNzs0gftsLfgKt57wWHJ0o=
golang.org/x/sys v0.12.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg= golang.org/x/sys v0.12.0/go.mod h1:oPkhp1MJrh7nUepCBck5+mAzfO9JrbApNNgaTdGDITg=
gopkg.in/yaml.v3 v3.0.1 h1:fxVm/GzAzEWqLHuvctI91KS9hhNmmWOoWu0XTYJS7CA=
gopkg.in/yaml.v3 v3.0.1/go.mod h1:K4uyk7z7BCEPqu6E+C64Yfv1cQ7kz7rIZviUmN+EgEM=

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@ -8,26 +8,27 @@ import (
) )
type Error struct { type Error struct {
msg string Code int64
code int64 Msg string
StackTrace string
collection string collection string
index string index string
stackTrace string
err error // Wrapped error err error // Wrapped error
} }
func NewErr(code int64, msg string) *Error { func NewErr(code int64, msg string) *Error {
return &Error{ return &Error{
msg: msg, Code: code,
code: code, Msg: msg,
} }
} }
func (e *Error) Error() string { func (e *Error) Error() string {
if e.collection != "" || e.index != "" { if e.collection != "" || e.index != "" {
return fmt.Sprintf(`[%d] (%s/%s) %s`, e.code, e.collection, e.index, e.msg) return fmt.Sprintf(`[%d] (%s/%s) %s`, e.Code, e.collection, e.index, e.Msg)
} else { } else {
return fmt.Sprintf("[%d] %s", e.code, e.msg) return fmt.Sprintf("[%d] %s", e.Code, e.Msg)
} }
} }
@ -36,11 +37,15 @@ func (e *Error) Is(rhs error) bool {
if !ok { if !ok {
return false return false
} }
return e.code == e2.code return e.Code == e2.Code
}
func (e *Error) Unwrap() error {
return e.err
} }
func (e *Error) WithErr(err error) *Error { func (e *Error) WithErr(err error) *Error {
if e2, ok := err.(*Error); ok && e2.code == e.code { if e2, ok := err.(*Error); ok && e2.Code == e.Code {
return e2 return e2
} }
@ -49,18 +54,11 @@ func (e *Error) WithErr(err error) *Error {
return e2 return e2
} }
func (e *Error) Unwrap() error {
if e.err != nil {
return e.err
}
return e
}
func (e *Error) WithMsg(msg string, args ...any) *Error { func (e *Error) WithMsg(msg string, args ...any) *Error {
err := *e err := *e
err.msg += ": " + fmt.Sprintf(msg, args...) err.Msg += ": " + fmt.Sprintf(msg, args...)
if len(err.stackTrace) == 0 { if len(err.StackTrace) == 0 {
err.stackTrace = string(debug.Stack()) err.StackTrace = string(debug.Stack())
} }
return &err return &err
} }
@ -78,16 +76,16 @@ func (e *Error) WithIndex(s string) *Error {
} }
func (e *Error) msgTruncacted() string { func (e *Error) msgTruncacted() string {
if len(e.msg) > 255 { if len(e.Msg) > 255 {
return e.msg[:255] return e.Msg[:255]
} }
return e.msg return e.Msg
} }
func (e *Error) Write(w io.Writer) error { func (e *Error) Write(w io.Writer) error {
msg := e.msgTruncacted() msg := e.msgTruncacted()
if err := binary.Write(w, binary.LittleEndian, e.code); err != nil { if err := binary.Write(w, binary.LittleEndian, e.Code); err != nil {
return IO.WithErr(err) return IO.WithErr(err)
} }
@ -103,7 +101,7 @@ func (e *Error) Read(r io.Reader) error {
size uint8 size uint8
) )
if err := binary.Read(r, binary.LittleEndian, &e.code); err != nil { if err := binary.Read(r, binary.LittleEndian, &e.Code); err != nil {
return IO.WithErr(err) return IO.WithErr(err)
} }
@ -116,6 +114,6 @@ func (e *Error) Read(r io.Reader) error {
return IO.WithErr(err) return IO.WithErr(err)
} }
e.msg = string(msgBuf) e.Msg = string(msgBuf)
return nil return nil
} }

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@ -10,12 +10,12 @@ func FmtDetails(err error) string {
var s string var s string
if e.collection != "" || e.index != "" { if e.collection != "" || e.index != "" {
s = fmt.Sprintf(`[%d] (%s/%s) %s`, e.code, e.collection, e.index, e.msg) s = fmt.Sprintf(`[%d] (%s/%s) %s`, e.Code, e.collection, e.index, e.Msg)
} else { } else {
s = fmt.Sprintf("[%d] %s", e.code, e.msg) s = fmt.Sprintf("[%d] %s", e.Code, e.Msg)
} }
if len(e.stackTrace) != 0 { if len(e.StackTrace) != 0 {
s += "\n\nStack Trace:\n" + e.stackTrace + "\n" s += "\n\nStack Trace:\n" + e.StackTrace + "\n"
} }
return s return s

11
lib/rep/main_test.go Normal file
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@ -0,0 +1,11 @@
package rep
import (
"testing"
"go.uber.org/goleak"
)
func TestMain(m *testing.M) {
goleak.VerifyTestMain(m)
}

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@ -15,7 +15,7 @@ func (rep *Replicator) runWALGC() {
select { select {
case <-ticker.C: case <-ticker.C:
state := rep.getState() state := rep.getState()
before := time.Now().Unix() - rep.conf.WALSegMaxAgeSec before := time.Now().Unix() - rep.conf.WALSegGCAgeSec
if err := rep.wal.DeleteBefore(before, state.SeqNum); err != nil { if err := rep.wal.DeleteBefore(before, state.SeqNum); err != nil {
log.Printf("[WAL-GC] failed to delete wal segments: %v", err) log.Printf("[WAL-GC] failed to delete wal segments: %v", err)
} }

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@ -2,6 +2,7 @@ package rep
import ( import (
"io" "io"
"log"
"net" "net"
"os" "os"
"sync" "sync"
@ -35,8 +36,8 @@ type App struct {
// SendState: The primary may need to send storage state to a secondary node. // SendState: The primary may need to send storage state to a secondary node.
SendState func(conn net.Conn) error SendState func(conn net.Conn) error
// (1) RecvState: Secondary nodes may need to load state from the primary if the // (1) RecvState: Secondary nodes may need to load state from the primary if
// WAL is too far behind. // the WAL is too far behind.
RecvState func(conn net.Conn) error RecvState func(conn net.Conn) error
// (2) InitStorage: Prepare application storage for possible calls to // (2) InitStorage: Prepare application storage for possible calls to
@ -94,41 +95,49 @@ func Open(app App, conf Config) (*Replicator, error) {
rep.client = newClient(rep.conf.PrimaryEndpoint, rep.conf.ReplicationPSK, rep.conf.NetTimeout) rep.client = newClient(rep.conf.PrimaryEndpoint, rep.conf.ReplicationPSK, rep.conf.NetTimeout)
if err := rep.initDirectories(); err != nil { if err := rep.initDirectories(); err != nil {
log.Printf("Failed to init directories: %v", err)
return nil, err return nil, err
} }
if err := rep.acquireLock(); err != nil { if err := rep.acquireLock(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to acquire lock: %v", err)
return nil, err return nil, err
} }
if err := rep.loadLocalState(); err != nil { if err := rep.loadLocalState(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to load local state: %v", err)
return nil, err return nil, err
} }
if err := rep.openWAL(); err != nil { if err := rep.openWAL(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to open WAL: %v", err)
return nil, err return nil, err
} }
if err := rep.recvStateIfNecessary(); err != nil { if err := rep.recvStateIfNecessary(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to recv state: %v", err)
return nil, err return nil, err
} }
if err := rep.app.InitStorage(); err != nil { if err := rep.app.InitStorage(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to init storage: %v", err)
return nil, err return nil, err
} }
if err := rep.replay(); err != nil { if err := rep.replay(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to replay: %v", err)
return nil, err return nil, err
} }
if err := rep.app.LoadFromStorage(); err != nil { if err := rep.app.LoadFromStorage(); err != nil {
rep.Close() rep.Close()
log.Printf("Failed to load from storage: %v", err)
return nil, err return nil, err
} }

View File

@ -56,6 +56,7 @@ func (h TestAppHarness) Run(t *testing.T) {
WALSegMaxAgeSec: 1, WALSegMaxAgeSec: 1,
WALSegGCAgeSec: 1, WALSegGCAgeSec: 1,
}) })
defer app2.Close()
val.MethodByName(method.Name).Call([]reflect.Value{ val.MethodByName(method.Name).Call([]reflect.Value{
reflect.ValueOf(t), reflect.ValueOf(t),

11
lib/wal/main_test.go Normal file
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@ -0,0 +1,11 @@
package wal
import (
"testing"
"go.uber.org/goleak"
)
func TestMain(m *testing.M) {
goleak.VerifyTestMain(m)
}

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@ -1,7 +1,6 @@
package mdb package mdb
import ( import (
"bytes"
"encoding/json" "encoding/json"
"errors" "errors"
"hash/crc64" "hash/crc64"
@ -25,8 +24,6 @@ type Collection[T any] struct {
uniqueIndices []*Index[T] uniqueIndices []*Index[T]
ByID *Index[T] ByID *Index[T]
buf *bytes.Buffer
} }
type CollectionConfig[T any] struct { type CollectionConfig[T any] struct {
@ -67,7 +64,6 @@ func NewCollection[T any](db *Database, name string, conf *CollectionConfig[T])
validate: conf.Validate, validate: conf.Validate,
indices: []*Index[T]{}, indices: []*Index[T]{},
uniqueIndices: []*Index[T]{}, uniqueIndices: []*Index[T]{},
buf: &bytes.Buffer{},
} }
db.addCollection(c.collectionID, c, &collectionState[T]{ db.addCollection(c.collectionID, c, &collectionState[T]{
@ -108,32 +104,6 @@ type indexConfig[T any] struct {
Include func(item *T) bool Include func(item *T) bool
} }
func (c *Collection[T]) Get(tx *Snapshot, id uint64) (*T, bool) {
x := new(T)
c.setID(x, id)
return c.ByID.Get(tx, x)
}
func (c *Collection[T]) List(tx *Snapshot, ids []uint64, out []*T) []*T {
if len(ids) == 0 {
return out[:0]
}
if cap(out) < len(ids) {
out = make([]*T, len(ids))
}
out = out[:0]
for _, id := range ids {
item, ok := c.Get(tx, id)
if ok {
out = append(out, item)
}
}
return out
}
// AddIndex: Add an index to the collection. // AddIndex: Add an index to the collection.
func (c *Collection[T]) addIndex(conf indexConfig[T]) *Index[T] { func (c *Collection[T]) addIndex(conf indexConfig[T]) *Index[T] {
var less func(*T, *T) bool var less func(*T, *T) bool
@ -160,6 +130,7 @@ func (c *Collection[T]) addIndex(conf indexConfig[T]) *Index[T] {
} }
index := &Index[T]{ index := &Index[T]{
db: c.db,
collectionID: c.collectionID, collectionID: c.collectionID,
name: conf.Name, name: conf.Name,
indexID: c.getState(c.db.Snapshot()).addIndex(indexState), indexID: c.getState(c.db.Snapshot()).addIndex(indexState),
@ -175,7 +146,35 @@ func (c *Collection[T]) addIndex(conf indexConfig[T]) *Index[T] {
return index return index
} }
func (c *Collection[T]) Get(tx *Snapshot, id uint64) *T {
if tx == nil {
tx = c.db.Snapshot()
}
item := new(T)
c.setID(item, id)
return c.ByID.Get(tx, item)
}
func (c *Collection[T]) Has(tx *Snapshot, id uint64) bool {
if tx == nil {
tx = c.db.Snapshot()
}
item := new(T)
c.setID(item, id)
return c.ByID.Has(tx, item)
}
func (c *Collection[T]) Insert(tx *Snapshot, userItem *T) error { func (c *Collection[T]) Insert(tx *Snapshot, userItem *T) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.insert(tx, userItem)
})
}
return c.insert(tx, userItem)
}
func (c *Collection[T]) insert(tx *Snapshot, userItem *T) error {
if err := c.ensureMutable(tx); err != nil { if err := c.ensureMutable(tx); err != nil {
return err return err
} }
@ -203,6 +202,15 @@ func (c *Collection[T]) Insert(tx *Snapshot, userItem *T) error {
} }
func (c *Collection[T]) Update(tx *Snapshot, userItem *T) error { func (c *Collection[T]) Update(tx *Snapshot, userItem *T) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.update(tx, userItem)
})
}
return c.update(tx, userItem)
}
func (c *Collection[T]) update(tx *Snapshot, userItem *T) error {
if err := c.ensureMutable(tx); err != nil { if err := c.ensureMutable(tx); err != nil {
return err return err
} }
@ -234,7 +242,37 @@ func (c *Collection[T]) Update(tx *Snapshot, userItem *T) error {
return nil return nil
} }
func (c *Collection[T]) UpdateFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.updateFunc(tx, id, update)
})
}
return c.updateFunc(tx, id, update)
}
func (c *Collection[T]) updateFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
item := c.Get(tx, id)
if item == nil {
return errs.NotFound
}
if err := update(item); err != nil {
return err
}
c.setID(item, id) // Don't allow the ID to change.
return c.update(tx, item)
}
func (c *Collection[T]) Upsert(tx *Snapshot, item *T) error { func (c *Collection[T]) Upsert(tx *Snapshot, item *T) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.upsert(tx, item)
})
}
return c.upsert(tx, item)
}
func (c *Collection[T]) upsert(tx *Snapshot, item *T) error {
err := c.Insert(tx, item) err := c.Insert(tx, item)
if err == nil { if err == nil {
return nil return nil
@ -245,7 +283,46 @@ func (c *Collection[T]) Upsert(tx *Snapshot, item *T) error {
return err return err
} }
func (c *Collection[T]) UpsertFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
if tx == nil {
c.db.Update(func(tx *Snapshot) error {
return c.upsertFunc(tx, id, update)
})
}
return c.upsertFunc(tx, id, update)
}
func (c *Collection[T]) upsertFunc(tx *Snapshot, id uint64, update func(item *T) error) error {
insert := false
item := c.Get(tx, id)
if item == nil {
item = new(T)
insert = true
}
if err := update(item); err != nil {
return err
}
c.setID(item, id) // Don't allow the ID to change.
if insert {
return c.insert(tx, item)
}
return c.update(tx, item)
}
func (c *Collection[T]) Delete(tx *Snapshot, itemID uint64) error { func (c *Collection[T]) Delete(tx *Snapshot, itemID uint64) error {
if tx == nil {
return c.db.Update(func(tx *Snapshot) error {
return c.delete(tx, itemID)
})
}
return c.delete(tx, itemID)
}
func (c *Collection[T]) delete(tx *Snapshot, itemID uint64) error {
if err := c.ensureMutable(tx); err != nil { if err := c.ensureMutable(tx); err != nil {
return err return err
} }
@ -253,6 +330,13 @@ func (c *Collection[T]) Delete(tx *Snapshot, itemID uint64) error {
return c.deleteItem(tx, itemID) return c.deleteItem(tx, itemID)
} }
func (c *Collection[T]) Count(tx *Snapshot) int {
if tx == nil {
tx = c.db.Snapshot()
}
return c.ByID.Count(tx)
}
func (c *Collection[T]) getByID(tx *Snapshot, itemID uint64) (*T, bool) { func (c *Collection[T]) getByID(tx *Snapshot, itemID uint64) (*T, bool) {
x := new(T) x := new(T)
c.setID(x, itemID) c.setID(x, itemID)

67
mdb/db-primary.go Normal file
View File

@ -0,0 +1,67 @@
package mdb
/*
func (db *Database) openPrimary() (err error) {
wal, err := cwal.Open(db.walRootDir, cwal.Config{
SegMinCount: db.conf.WALSegMinCount,
SegMaxAgeSec: db.conf.WALSegMaxAgeSec,
})
pFile, err := pfile.Open(db.pageFilePath,
pFile, err := openPageFileAndReplayWAL(db.rootDir)
if err != nil {
return err
}
defer pFile.Close()
pfHeader, err := pFile.ReadHeader()
if err != nil {
return err
}
tx := db.Snapshot()
tx.seqNum = pfHeader.SeqNum
tx.updatedAt = pfHeader.UpdatedAt
pIndex, err := pagefile.NewIndex(pFile)
if err != nil {
return err
}
err = pFile.IterateAllocated(pIndex, func(cID, iID uint64, data []byte) error {
return db.loadItem(tx, cID, iID, data)
})
if err != nil {
return err
}
w, err := cwal.OpenWriter(db.walRootDir, &cwal.WriterConfig{
SegMinCount: db.conf.WALSegMinCount,
SegMaxAgeSec: db.conf.WALSegMaxAgeSec,
})
if err != nil {
return err
}
db.done.Add(1)
go txAggregator{
Stop: db.stop,
Done: db.done,
ModChan: db.modChan,
W: w,
Index: pIndex,
Snapshot: db.snapshot,
}.Run()
db.done.Add(1)
go (&fileWriter{
Stop: db.stop,
Done: db.done,
PageFilePath: db.pageFilePath,
WALRootDir: db.walRootDir,
}).Run()
return nil
}
*/

View File

@ -99,6 +99,7 @@ func (db *Database) repApply(rec wal.Record) (err error) {
} }
tx.seqNum = rec.SeqNum tx.seqNum = rec.SeqNum
tx.timestampMS = rec.TimestampMS tx.timestampMS = rec.TimestampMS
tx.setReadOnly()
db.snapshot.Store(tx) db.snapshot.Store(tx)
return nil return nil
} }

129
mdb/db-secondary.go Normal file
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@ -0,0 +1,129 @@
package mdb
/*
func (db *Database) openSecondary() (err error) {
if db.shouldLoadFromPrimary() {
if err := db.loadFromPrimary(); err != nil {
return err
}
}
log.Printf("Opening page-file...")
pFile, err := openPageFileAndReplayWAL(db.rootDir)
if err != nil {
return err
}
defer pFile.Close()
pfHeader, err := pFile.ReadHeader()
if err != nil {
return err
}
log.Printf("Building page-file index...")
pIndex, err := pagefile.NewIndex(pFile)
if err != nil {
return err
}
tx := db.Snapshot()
tx.seqNum = pfHeader.SeqNum
tx.updatedAt = pfHeader.UpdatedAt
log.Printf("Loading data into memory...")
err = pFile.IterateAllocated(pIndex, func(cID, iID uint64, data []byte) error {
return db.loadItem(tx, cID, iID, data)
})
if err != nil {
return err
}
log.Printf("Creating writer...")
w, err := cswal.OpenWriter(db.walRootDir, &cswal.WriterConfig{
SegMinCount: db.conf.WALSegMinCount,
SegMaxAgeSec: db.conf.WALSegMaxAgeSec,
})
if err != nil {
return err
}
db.done.Add(1)
go (&walFollower{
Stop: db.stop,
Done: db.done,
W: w,
Client: NewClient(db.conf.PrimaryURL, db.conf.ReplicationPSK, db.conf.NetTimeout),
}).Run()
db.done.Add(1)
go (&follower{
Stop: db.stop,
Done: db.done,
WALRootDir: db.walRootDir,
SeqNum: pfHeader.SeqNum,
ApplyChanges: db.applyChanges,
}).Run()
db.done.Add(1)
go (&fileWriter{
Stop: db.stop,
Done: db.done,
PageFilePath: db.pageFilePath,
WALRootDir: db.walRootDir,
}).Run()
return nil
}
func (db *Database) shouldLoadFromPrimary() bool {
if _, err := os.Stat(db.walRootDir); os.IsNotExist(err) {
log.Printf("WAL doesn't exist.")
return true
}
if _, err := os.Stat(db.pageFilePath); os.IsNotExist(err) {
log.Printf("Page-file doesn't exist.")
return true
}
return false
}
func (db *Database) loadFromPrimary() error {
client := NewClient(db.conf.PrimaryURL, db.conf.ReplicationPSK, db.conf.NetTimeout)
defer client.Disconnect()
log.Printf("Loading data from primary...")
if err := os.RemoveAll(db.pageFilePath); err != nil {
log.Printf("Failed to remove page-file: %s", err)
return errs.IO.WithErr(err) // Caller can retry.
}
if err := os.RemoveAll(db.walRootDir); err != nil {
log.Printf("Failed to remove WAL: %s", err)
return errs.IO.WithErr(err) // Caller can retry.
}
err := client.DownloadPageFile(db.pageFilePath+".tmp", db.pageFilePath)
if err != nil {
log.Printf("Failed to get page-file from primary: %s", err)
return err // Caller can retry.
}
pfHeader, err := pagefile.ReadHeader(db.pageFilePath)
if err != nil {
log.Printf("Failed to read page-file sequence number: %s", err)
return err // Caller can retry.
}
if err = cswal.CreateEx(db.walRootDir, pfHeader.SeqNum+1); err != nil {
log.Printf("Failed to initialize WAL: %s", err)
return err // Caller can retry.
}
return nil
}
*/

View File

@ -54,8 +54,8 @@ var testDBTestCases = []DBTestCase{{
Name: "Update", Name: "Update",
Update: func(t *testing.T, db TestDB, tx *Snapshot) error { Update: func(t *testing.T, db TestDB, tx *Snapshot) error {
user, ok := db.Users.ByID.Get(tx, &User{ID: 1}) user := db.Users.ByID.Get(tx, &User{ID: 1})
if !ok { if user == nil {
return errs.NotFound return errs.NotFound
} }
user.Name = "Bob" user.Name = "Bob"
@ -323,8 +323,8 @@ var testDBTestCases = []DBTestCase{{
Name: "Update", Name: "Update",
Update: func(t *testing.T, db TestDB, tx *Snapshot) error { Update: func(t *testing.T, db TestDB, tx *Snapshot) error {
user, ok := db.Users.ByID.Get(tx, &User{ID: 1}) user := db.Users.ByID.Get(tx, &User{ID: 1})
if !ok { if user == nil {
return errs.NotFound return errs.NotFound
} }
user.Name = "Bob" user.Name = "Bob"
@ -493,8 +493,8 @@ var testDBTestCases = []DBTestCase{{
Name: "Update", Name: "Update",
Update: func(t *testing.T, db TestDB, tx *Snapshot) error { Update: func(t *testing.T, db TestDB, tx *Snapshot) error {
u, ok := db.Users.ByID.Get(tx, &User{ID: 2}) u := db.Users.ByID.Get(tx, &User{ID: 2})
if !ok { if u == nil {
return errs.NotFound return errs.NotFound
} }
@ -609,16 +609,16 @@ var testDBTestCases = []DBTestCase{{
Update: func(t *testing.T, db TestDB, tx *Snapshot) error { Update: func(t *testing.T, db TestDB, tx *Snapshot) error {
expected := &User{ID: 1, Name: "Alice", Email: "a@b.com"} expected := &User{ID: 1, Name: "Alice", Email: "a@b.com"}
u, ok := db.Users.ByID.Get(tx, &User{ID: 1}) u := db.Users.ByID.Get(tx, &User{ID: 1})
if !ok { if u == nil {
return errs.NotFound return errs.NotFound
} }
if !reflect.DeepEqual(u, expected) { if !reflect.DeepEqual(u, expected) {
return errors.New("Not equal (id)") return errors.New("Not equal (id)")
} }
u, ok = db.Users.ByEmail.Get(tx, &User{Email: "a@b.com"}) u = db.Users.ByEmail.Get(tx, &User{Email: "a@b.com"})
if !ok { if u == nil {
return errs.NotFound return errs.NotFound
} }
if !reflect.DeepEqual(u, expected) { if !reflect.DeepEqual(u, expected) {
@ -637,11 +637,11 @@ var testDBTestCases = []DBTestCase{{
Name: "Get not found", Name: "Get not found",
Update: func(t *testing.T, db TestDB, tx *Snapshot) error { Update: func(t *testing.T, db TestDB, tx *Snapshot) error {
if _, ok := db.Users.ByID.Get(tx, &User{ID: 2}); ok { if u := db.Users.ByID.Get(tx, &User{ID: 2}); u != nil {
return errors.New("Found (id)") return errors.New("Found (id)")
} }
if _, ok := db.Users.ByEmail.Get(tx, &User{Email: "x@b.com"}); ok { if u := db.Users.ByEmail.Get(tx, &User{Email: "x@b.com"}); u != nil {
return errors.New("Found (email)") return errors.New("Found (email)")
} }
@ -743,29 +743,25 @@ var testDBTestCases = []DBTestCase{{
first := true first := true
pivot := User{Name: "User1"} pivot := User{Name: "User1"}
db.Users.ByName.AscendAfter(tx, &pivot, func(u *User) bool { for u := range db.Users.ByName.AscendAfter(tx, &pivot) {
u.Name += "Mod" u.Name += "Mod"
if err = db.Users.Update(tx, u); err != nil { if err = db.Users.Update(tx, u); err != nil {
return false return err
} }
if first { if first {
first = false first = false
return true continue
} }
prev, ok := db.Users.ByID.Get(tx, &User{ID: u.ID - 1}) prev := db.Users.ByID.Get(tx, &User{ID: u.ID - 1})
if !ok { if prev == nil {
err = errors.New("Previous user not found") return errors.New("Previous user not found")
return false
} }
if !strings.HasSuffix(prev.Name, "Mod") { if !strings.HasSuffix(prev.Name, "Mod") {
err = errors.New("Incorrect user name: " + prev.Name) return errors.New("Incorrect user name: " + prev.Name)
return false }
} }
return true
})
return nil return nil
}, },
@ -801,29 +797,26 @@ var testDBTestCases = []DBTestCase{{
} }
first := true first := true
db.Users.ByName.DescendAfter(tx, &User{Name: "User5Mod"}, func(u *User) bool { for u := range db.Users.ByName.DescendAfter(tx, &User{Name: "User5Mod"}) {
u.Name = strings.TrimSuffix(u.Name, "Mod") u.Name = strings.TrimSuffix(u.Name, "Mod")
if err = db.Users.Update(tx, u); err != nil { if err = db.Users.Update(tx, u); err != nil {
return false return err
} }
if first { if first {
first = false first = false
return true continue
} }
prev, ok := db.Users.ByID.Get(tx, &User{ID: u.ID + 1}) prev := db.Users.ByID.Get(tx, &User{ID: u.ID + 1})
if !ok { if prev == nil {
err = errors.New("Previous user not found") return errors.New("Previous user not found")
return false
} }
if strings.HasSuffix(prev.Name, "Mod") { if strings.HasSuffix(prev.Name, "Mod") {
err = errors.New("Incorrect user name: " + prev.Name) return errors.New("Incorrect user name: " + prev.Name)
return false }
} }
return true
})
return nil return nil
}, },

View File

@ -72,7 +72,7 @@ func testRunner_testCase(t *testing.T, testCase DBTestCase) {
} }
// TODO: Why is this necessary? // TODO: Why is this necessary?
time.Sleep(time.Second) //time.Sleep(time.Second)
finalStep := testCase.Steps[len(testCase.Steps)-1] finalStep := testCase.Steps[len(testCase.Steps)-1]
secondarySnapshot := db2.Snapshot() secondarySnapshot := db2.Snapshot()
@ -136,21 +136,21 @@ func checkSlicesEqual[T any](t *testing.T, name string, actual, expected []T) {
func checkMinMaxEqual[T any](t *testing.T, name string, tx *Snapshot, index *Index[T], expected []T) { func checkMinMaxEqual[T any](t *testing.T, name string, tx *Snapshot, index *Index[T], expected []T) {
if len(expected) == 0 { if len(expected) == 0 {
if min, ok := index.Min(tx); ok { if min := index.Min(tx); min != nil {
t.Fatal(min) t.Fatal(min)
} }
if max, ok := index.Max(tx); ok { if max := index.Max(tx); max != nil {
t.Fatal(max) t.Fatal(max)
} }
return return
} }
min, ok := index.Min(tx) min := index.Min(tx)
if !ok { if min == nil {
t.Fatal("No min") t.Fatal("No min")
} }
max, ok := index.Max(tx) max := index.Max(tx)
if !ok { if max == nil {
t.Fatal("No max") t.Fatal("No max")
} }

View File

@ -73,6 +73,10 @@ type Database struct {
} }
func New(conf Config) *Database { func New(conf Config) *Database {
if conf.NetTimeout <= 0 {
conf.NetTimeout = time.Minute
}
if conf.MaxConcurrentUpdates <= 0 { if conf.MaxConcurrentUpdates <= 0 {
conf.MaxConcurrentUpdates = 32 conf.MaxConcurrentUpdates = 32
} }

View File

@ -1,7 +1,6 @@
package mdb package mdb
import ( import (
"fmt"
"reflect" "reflect"
"testing" "testing"
) )
@ -20,18 +19,16 @@ func (i Index[T]) AssertEqual(t *testing.T, tx1, tx2 *Snapshot) {
} }
errStr := "" errStr := ""
i.Ascend(tx1, func(item1 *T) bool { iter := i.Ascend(tx1)
item2, ok := i.Get(tx2, item1) for item1 := range iter {
if !ok { item2 := i.Get(tx2, item1)
errStr = fmt.Sprintf("Indices don't match. %v not found.", item1) if item2 == nil {
return false t.Fatalf("Indices don't match. %v not found.", item1)
} }
if !reflect.DeepEqual(item1, item2) { if !reflect.DeepEqual(item1, item2) {
errStr = fmt.Sprintf("%v != %v", item1, item2) t.Fatalf("%v != %v", item1, item2)
return false }
} }
return true
})
if errStr != "" { if errStr != "" {
t.Fatal(errStr) t.Fatal(errStr)

View File

@ -1,6 +1,7 @@
package mdb package mdb
import ( import (
"iter"
"unsafe" "unsafe"
"github.com/google/btree" "github.com/google/btree"
@ -63,6 +64,7 @@ func NewUniquePartialIndex[T any](
// ---------------------------------------------------------------------------- // ----------------------------------------------------------------------------
type Index[T any] struct { type Index[T any] struct {
db *Database
name string name string
collectionID uint64 collectionID uint64
indexID uint64 indexID uint64
@ -70,12 +72,19 @@ type Index[T any] struct {
copy func(*T) *T copy func(*T) *T
} }
func (i *Index[T]) Get(tx *Snapshot, in *T) (item *T, ok bool) { func (i *Index[T]) ensureSnapshot(tx *Snapshot) *Snapshot {
tPtr, ok := i.get(tx, in) if tx == nil {
if !ok { tx = i.db.Snapshot()
return item, false
} }
return i.copy(tPtr), true return tx
}
func (i *Index[T]) Get(tx *Snapshot, in *T) *T {
tx = i.ensureSnapshot(tx)
if tPtr, ok := i.get(tx, in); ok {
return i.copy(tPtr)
}
return nil
} }
func (i *Index[T]) get(tx *Snapshot, in *T) (*T, bool) { func (i *Index[T]) get(tx *Snapshot, in *T) (*T, bool) {
@ -83,95 +92,65 @@ func (i *Index[T]) get(tx *Snapshot, in *T) (*T, bool) {
} }
func (i *Index[T]) Has(tx *Snapshot, in *T) bool { func (i *Index[T]) Has(tx *Snapshot, in *T) bool {
tx = i.ensureSnapshot(tx)
return i.btree(tx).Has(in) return i.btree(tx).Has(in)
} }
func (i *Index[T]) Min(tx *Snapshot) (item *T, ok bool) { func (i *Index[T]) Min(tx *Snapshot) *T {
tPtr, ok := i.btree(tx).Min() tx = i.ensureSnapshot(tx)
if !ok { if tPtr, ok := i.btree(tx).Min(); ok {
return item, false return i.copy(tPtr)
} }
return i.copy(tPtr), true
}
func (i *Index[T]) Max(tx *Snapshot) (item *T, ok bool) {
tPtr, ok := i.btree(tx).Max()
if !ok {
return item, false
}
return i.copy(tPtr), true
}
func (i *Index[T]) Ascend(tx *Snapshot, each func(*T) bool) {
i.btreeForIter(tx).Ascend(func(t *T) bool {
return each(i.copy(t))
})
}
func (i *Index[T]) AscendAfter(tx *Snapshot, after *T, each func(*T) bool) {
i.btreeForIter(tx).AscendGreaterOrEqual(after, func(t *T) bool {
return each(i.copy(t))
})
}
func (i *Index[T]) Descend(tx *Snapshot, each func(*T) bool) {
i.btreeForIter(tx).Descend(func(t *T) bool {
return each(i.copy(t))
})
}
func (i *Index[T]) DescendAfter(tx *Snapshot, after *T, each func(*T) bool) {
i.btreeForIter(tx).DescendLessOrEqual(after, func(t *T) bool {
return each(i.copy(t))
})
}
type ListArgs[T any] struct {
Desc bool // True for descending order, otherwise ascending.
After *T // If after is given, iterate after (and including) the value.
While func(*T) bool // Continue iterating until While is false.
Limit int // Maximum number of items to return. 0 => All.
}
func (i *Index[T]) List(tx *Snapshot, args ListArgs[T], out []*T) []*T {
if args.Limit < 0 {
return nil return nil
} }
if args.While == nil { func (i *Index[T]) Max(tx *Snapshot) *T {
args.While = func(*T) bool { return true } tx = i.ensureSnapshot(tx)
if tPtr, ok := i.btree(tx).Max(); ok {
return i.copy(tPtr)
} }
return nil
}
size := args.Limit func (i *Index[T]) Ascend(tx *Snapshot) iter.Seq[*T] {
if size == 0 { tx = i.ensureSnapshot(tx)
size = 32 // Why not? return func(yield func(*T) bool) {
i.btreeForIter(tx).Ascend(func(t *T) bool {
return yield(i.copy(t))
})
} }
}
items := out[:0] func (i *Index[T]) AscendAfter(tx *Snapshot, after *T) iter.Seq[*T] {
tx = i.ensureSnapshot(tx)
return func(yield func(*T) bool) {
i.btreeForIter(tx).AscendGreaterOrEqual(after, func(t *T) bool {
return yield(i.copy(t))
})
}
}
each := func(item *T) bool { func (i *Index[T]) Descend(tx *Snapshot) iter.Seq[*T] {
if !args.While(item) { tx = i.ensureSnapshot(tx)
return false return func(yield func(*T) bool) {
} i.btreeForIter(tx).Descend(func(t *T) bool {
items = append(items, item) return yield(i.copy(t))
return args.Limit == 0 || len(items) < args.Limit })
} }
}
if args.Desc { func (i *Index[T]) DescendAfter(tx *Snapshot, after *T) iter.Seq[*T] {
if args.After != nil { tx = i.ensureSnapshot(tx)
i.DescendAfter(tx, args.After, each) return func(yield func(*T) bool) {
} else { i.btreeForIter(tx).DescendLessOrEqual(after, func(t *T) bool {
i.Descend(tx, each) return yield(i.copy(t))
} })
} else {
if args.After != nil {
i.AscendAfter(tx, args.After, each)
} else {
i.Ascend(tx, each)
}
} }
}
return items func (i *Index[T]) Count(tx *Snapshot) int {
tx = i.ensureSnapshot(tx)
return i.btree(tx).Len()
} }
// ---------------------------------------------------------------------------- // ----------------------------------------------------------------------------

View File

@ -1,9 +1,8 @@
package mdb package mdb
func (i Index[T]) Dump(tx *Snapshot) (l []T) { func (i Index[T]) Dump(tx *Snapshot) (l []T) {
i.Ascend(tx, func(t *T) bool { for t := range i.Ascend(tx) {
l = append(l, *t) l = append(l, *t)
return true }
})
return l return l
} }

11
mdb/main_test.go Normal file
View File

@ -0,0 +1,11 @@
package mdb
import (
"testing"
"go.uber.org/goleak"
)
func TestMain(m *testing.M) {
goleak.VerifyTestMain(m)
}

View File

@ -51,6 +51,10 @@ func (f *freeList) Push(pages ...uint64) {
} }
} }
func (f *freeList) SetNextPage(nextPage uint64) {
f.nextPage = nextPage
}
func (f *freeList) Pop(count int, out []uint64) []uint64 { func (f *freeList) Pop(count int, out []uint64) []uint64 {
out = out[:0] out = out[:0]

View File

@ -13,14 +13,19 @@ type Index struct {
} }
func NewIndex(f *File) (*Index, error) { func NewIndex(f *File) (*Index, error) {
firstPage, err := f.pageCount()
if err != nil {
return nil, err
}
idx := &Index{ idx := &Index{
fList: newFreeList(0), fList: newFreeList(firstPage),
aList: *newAllocList(), aList: *newAllocList(),
seen: map[[2]uint64]struct{}{}, seen: map[[2]uint64]struct{}{},
mask: []bool{}, mask: []bool{},
} }
err := f.iterate(func(pageID uint64, page dataPage) error { err = f.iterate(func(pageID uint64, page dataPage) error {
header := page.Header() header := page.Header()
switch header.PageType { switch header.PageType {
case pageTypeHead: case pageTypeHead:

View File

@ -134,6 +134,21 @@ func (pf *File) writePage(page dataPage, id uint64) error {
// Reading // Reading
// ---------------------------------------------------------------------------- // ----------------------------------------------------------------------------
func (pf *File) pageCount() (uint64, error) {
fi, err := pf.f.Stat()
if err != nil {
return 0, errs.IO.WithErr(err)
}
fileSize := fi.Size()
if fileSize%pageSize != 0 {
return 0, errs.Corrupt.WithMsg("File size isn't a multiple of page size.")
}
maxPage := uint64(fileSize / pageSize)
return maxPage, nil
}
func (pf *File) iterate(each func(pageID uint64, page dataPage) error) error { func (pf *File) iterate(each func(pageID uint64, page dataPage) error) error {
pf.lock.RLock() pf.lock.RLock()
defer pf.lock.RUnlock() defer pf.lock.RUnlock()

View File

@ -133,8 +133,8 @@ func (db DataDB) modifyOnce() {
func (db DataDB) ComputeCRC(tx *Snapshot) uint32 { func (db DataDB) ComputeCRC(tx *Snapshot) uint32 {
h := crc32.NewIEEE() h := crc32.NewIEEE()
for dataID := uint64(1); dataID < 10; dataID++ { for dataID := uint64(1); dataID < 10; dataID++ {
d, ok := db.Datas.ByID.Get(tx, &DataItem{ID: dataID}) d := db.Datas.ByID.Get(tx, &DataItem{ID: dataID})
if !ok { if d == nil {
continue continue
} }
h.Write(d.Data) h.Write(d.Data)
@ -143,8 +143,8 @@ func (db DataDB) ComputeCRC(tx *Snapshot) uint32 {
} }
func (db DataDB) ReadCRC(tx *Snapshot) uint32 { func (db DataDB) ReadCRC(tx *Snapshot) uint32 {
r, ok := db.CRCs.ByID.Get(tx, &CRCItem{ID: 1}) r := db.CRCs.ByID.Get(tx, &CRCItem{ID: 1})
if !ok { if r == nil {
return 0 return 0
} }
return r.CRC32 return r.CRC32

View File

@ -136,8 +136,8 @@ func (db DataDB) modifyOnce() {
func (db DataDB) ComputeCRC(tx *mdb.Snapshot) uint32 { func (db DataDB) ComputeCRC(tx *mdb.Snapshot) uint32 {
h := crc32.NewIEEE() h := crc32.NewIEEE()
for dataID := uint64(1); dataID < 10; dataID++ { for dataID := uint64(1); dataID < 10; dataID++ {
d, ok := db.Datas.ByID.Get(tx, &DataItem{ID: dataID}) d := db.Datas.ByID.Get(tx, &DataItem{ID: dataID})
if !ok { if d == nil {
continue continue
} }
h.Write(d.Data) h.Write(d.Data)
@ -146,8 +146,8 @@ func (db DataDB) ComputeCRC(tx *mdb.Snapshot) uint32 {
} }
func (db DataDB) ReadCRC(tx *mdb.Snapshot) uint32 { func (db DataDB) ReadCRC(tx *mdb.Snapshot) uint32 {
r, ok := db.CRCs.ByID.Get(tx, &CRCItem{ID: 1}) r := db.CRCs.ByID.Get(tx, &CRCItem{ID: 1})
if !ok { if r == nil {
return 0 return 0
} }
return r.CRC32 return r.CRC32